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DNA polymerase does not make mismatched base pairs because


A) there are no hydrogen bonds that line up between the mismatches.
B) the active site does not fit mismatches well.
C) the mismatched pairs make covalent bonds instead of hydrogen bonds.
D) the DNA primer does not allow for mismatched pairs.

E) A) and B)
F) A) and C)

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Describe the experiment that demonstrated that complete unwinding of the chromosome does not occur.

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John Cairnes grew E. coli in the presenc...

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Which enzyme synthesizes the RNA primer for DNA replication?


A) DNA polymerase
B) DNA primase
C) DNA polymerization
D) DNA Pol III

E) A) and D)
F) All of the above

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The 3 ' -hydroxyl group used to initiate DNA synthesis comes from


A) a RNA primer.
B) the magnesium ion.
C) uracils, always.
D) amino acids, always.

E) A) and B)
F) A) and C)

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What is the mechanism by which replication errors are fixed in E. coli?


A) degrading of the entire DNA strand to start over
B) base excision
C) mismatch repair
D) abasic repair

E) A) and B)
F) None of the above

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What are the mechanisms for excision nucleotide repairs in eukaryotes?


A) global genomic and mismatch
B) global genomic and base excision
C) transcription-coupled and partial genomic
D) transcription-coupled and global genomic

E) B) and C)
F) All of the above

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Why do helicase and gyrase need to work together?


A) Gyrase adds the RNA primer and helicase removes it.
B) Helicase unwinds DNA and gyrase relieves the torsional strain.
C) Helicase synthesizes DNA and gyrase prevents helicase from dissociating.
D) Gyrase synthesizes RNA primers and helicase.

E) All of the above
F) A) and B)

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Which of the following best describes base excision?


A) removal and replacement of individual bases that have been damaged by various chemical reactions
B) repair of large lesions that distort DNA
C) removal of individual bases that have been phosphorylated
D) repair of small lesions that distort DNA

E) B) and C)
F) C) and D)

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What is the difference between a transposon move and a retrotransposon move?

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Transposons move by a cut-and-paste mech...

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The importance of V(D) J recombination is that it gives rise to new


A) viruses being formed.
B) DNA combinations.
C) antibodies.
D) RNA combinations.

E) B) and C)
F) None of the above

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Contrast missense mutations, nonsense mutations, and silent mutations.

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It takes three nucleotide bases in DNA t...

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Which of the following functions does a reverse transcriptase perform?


A) proofreading
B) exonuclease activity
C) convert RNA to DNA
D) convert DNA to RNA

E) A) and B)
F) All of the above

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Bidirectional replication is defined as replication


A) with one replication fork.
B) with two replication forks.
C) that unwinds the DNA completely to replicate.
D) that replicates the DNA in a given direction.

E) All of the above
F) A) and B)

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How is an individual with Lynch syndrome at higher risk for cancer?

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Lynch syndrome is caused by autosomal do...

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The main function of the primosome is to


A) synthesize primers for leading strand synthesis.
B) synthesize primers for lagging strand synthesis.
C) bind to single-stranded DNA to prevent reannealing.
D) synthesize new DNA on leading and lagging strand.

E) B) and C)
F) A) and B)

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Describe the Ames test.

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The test determines whether or not a sub...

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When a cytosine is deaminated to form uracil and removed by glycosylase enzymes, a __________ site is generated.


A) nonbasic
B) abasic
C) dibasic
D) deaminated

E) All of the above
F) None of the above

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The best definition for DNA replication is when a cell copies its genome and is __________ cell division.


A) entire; a required element of
B) partial; a required element of
C) entire; not required for
D) partial; not required for

E) A) and D)
F) B) and C)

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What role does PARP1 have in repairing a single-strand DNA break?


A) recognizes the break
B) removes the methyl group from guanine
C) replaces the mismatched pair
D) absorbs light to become excited

E) None of the above
F) All of the above

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What is NOT a likely repair system used if a strand of DNA has a pyrimidine dimer?


A) mismatch repair
B) direct repair pathway
C) base excision
D) nucleotide excision

E) A) and C)
F) A) and D)

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